Chemistry Links

 

HTML Rendering Of The Favorites Folder

For

Larry P. Taylor, Ph.D

aka "Harris"

 

Feedback appreciated; please send comments to:

Email: lpt

Last Validated On: 6 / 11 / 2013

Last Month's Download of this file = 532

My University Home     FGF Home

This is the chemistry subset from my  full collection (Harris Links ... ~ 7200 bookmarks). The categories of the total list are here.

Jump To:   Alchemy   Data Analysis  Modeling   Nomenclature  Organizations  Peptides  Molecular Biology

Chemistry

Abbreviations of Chemical Compounds - http://www.chemie.fu-berlin.de/cgi-bin/abbscomp
Alchemy Project - http://tuvalu.santafe.edu/~walter/AlChemy/alchemy.html
Animated Gas Lab (NASA) - http://www.grc.nasa.gov/WWW/K-12/airplane/Animation/frglab.html
Animation-Molecules in Motion - http://chemconnections.org/Java/molecules/index.html
Atomic Orbital Visualizations - http://daugerresearch.com/orbitals/
Biotechnology Workforce Problem Sets - http://www.bio-link.org/GMP/math.htm
CAS-SciFinder - http://www.cas.org/training/scifinder
Chem Sources - http://www.chemsources.com/
Chem Tutor - http://www.chemtutor.com/
Chem4Kids - http://www.chem4kids.com/
ChemCases - http://chemcases.com/index.htm
ChemClub - http://www.chemclub.com/
Chemguide - http://www.chemguide.co.uk/
Chemical element games - http://www.sheppardsoftware.com/Elementsgames.htm
Chemical Forums - http://www.chemicalforums.com/
Chemical Jeopardy - http://chemed.chem.pitt.edu/jeopardy/genchem/index.htm
Chemistry Behind Cleaning - http://www.bbcleaningservice.com/office/chemistry-behind-cleaning.html
Chemistry Dictionary (YOGI'S) - http://environmentalchemistry.com/yogi/chemistry/dictionary/
Chemistry Dictionary - http://www.babylon.com/define/24/Chemistry-Dictionary.html
Chemistry Ebooks - http://www.freebookcentre.net/Chemistry/Chemistry-Books-Online.html
Chemistry Explorer - http://www.webref.org/chemistry/chemistry.htm
Chemistry Games - http://www.mansfieldct.org/schools/mms/staff/hand/chemgames.htm
Chemistry Help - http://www.sglearnonline.com/chemistry-help.html
Chemistry Place - http://www.pearsonhighered.com/thechemistryplace/
Chemistry Resources - http://www.educationindex.com/chem/
Chemistry Study Cards - http://www.chemmybear.com/stdycrds.html
Chemistry-Best of the Web - http://botw.org/top/Science/Chemistry/
Chemistry-Historical Perspective - http://www.3rd1000.com/history/contents.htm
ChemPuter (Sheffield) - http://winter.group.shef.ac.uk/chemputer/
Chocolate - http://faculty.washington.edu/chudler/choco.html
Classic Chemistry - http://web.lemoyne.edu/~giunta/index.html
Combinatorial Chemistry Notes - http://www.screening-compounds.com/index.html
Combinatorial Chemistry - http://www.combinatorial.com/
Cooking Science - http://www.exploratorium.edu/cooking/index.html
Creative Chemistry - http://www.creative-chemistry.org.uk/
Database of Periodic Tables - http://www.meta-synthesis.com/webbook/35_pt/pt_database.php
Database- Plastics (IDES) - http://www.ides.com/
Database-ChemNavigator - http://www.chemnavigator.com./
Database-ChemSpider (Structures & Property) - http://www.chemspider.com/
Database-Materials Info - http://www.matweb.com/index.aspx
Database-MInerology - http://webmineral.com/
Database-NIST Chemistry WebBook - http://webbook.nist.gov/chemistry/
eMolecules - http://www.emolecules.com/
Environmental Chemistry - http://environmentalchemistry.com/
General Chemistry - http://antoine.frostburg.edu/chem/senese/101/
Helical Structures Foundation - http://www.helical-structures.org/
Heliconstruct - http://www.heliconstruct.com/
MacGyverisms - http://www.concentric.net/~jjdippel/macisms.html
Mark Rosengarten - http://www.markrosengarten.com/
Mass Spec - http://i-mass.com/
Molecules with Silly Names - http://www.chm.bris.ac.uk/sillymolecules/sillymols.htm
Mr. Kent's - http://www.kentchemistry.com/
My Chemistry Tutor - http://www.mychemistrytutor.com/
Name-Reaction - http://www.name-reaction.com/
NetBiochem - http://library.med.utah.edu/NetBiochem/NetWelco.htm
Orbitals-Grand Table - http://www.orbitals.com/orb/orbtable.htm
Orbitals-Hydrogenlike - http://www.uky.edu/~holler/html/orbitals_2.html
Orbitron-Gallery of Atomic Orbitals - http://winter.group.shef.ac.uk/orbitron/admin/references.html
Organic Chemistry Portal - http://www.organic-chemistry.org/
Organic Flashcards - http://legacyweb.chemistry.ohio-state.edu/flashcards/
Organic Structure Workbook - http://www3.nd.edu/~smithgrp/structure/workbook.html
Organoboron Chemistry - http://www.organoborons.com/
Periodic Table-Biochemical Spiral - http://umbbd.ethz.ch/periodic/spiral.html
Periodic Table-Comics - http://www.uky.edu/Projects/Chemcomics/
Periodic Table-Database - http://www.elementsdatabase.com/
Periodic Table-Dhaatu - http://www.dhaatu.com/
Periodic Table-Dynamic - http://www.ptable.com/
Periodic Table-Elements - http://www.periodictable.com/
Periodic Table-Freshney - http://www.freshney.org/
Periodic Table-Gray - http://theodoregray.com/PeriodicTable/
Periodic Table-Internet - http://www.chemicalelements.com/
Periodic Table-Los Alamos - http://periodic.lanl.gov/
Periodic Table-Nuclides - http://atom.kaeri.re.kr/
Periodic Table-Royal Society - http://www.rsc.org/periodic-table
Periodic Tables-Internet Database - http://www.meta-synthesis.com/webbook/35_pt/pt_database.php?PT_id=374
Periodic Table-WebElements - http://www.webelements.com/
Pyrotechnics (Dimock) - http://www.pyropage.com/
Separations Now - http://www.separationsnow.com/view/index.html
Silly or Unusual Names - http://www.chm.bris.ac.uk/sillymolecules/sillymols2.htm
Software-AOCR - http://www.aocr.ch/index.html
Software-CAMEO - http://www.epa.gov/emergencies/content/cameo/index.htm
Software-Chang Bioscience - http://www.changbioscience.com/
Software-CHEAQS - http://home.tiscali.nl/cheaqs/
Software-ChemBuddy - http://www.chembuddy.com/
Software-ChemDoodle - http://www.chemdoodle.com/
Software-Chemical Thesaurus - http://www.chemthes.com/
Software-Chemistry (Rolf's) - http://www.claessen.net/chemistry/soft_en.html
Software-ChemPen - http://www.chempensoftware.com/chempen.htm
Software-Chemware - http://chemware.co.nz/
Software-CompuChem - http://www.compuchem.com/
Software-Computational Net - http://www.ccl.net/index.shtml
Software-Cranium - http://www.molknow.com/Cranium/cranium.htm
Software-DynaFit - http://www.biokin.com/dynafit/
Software-HighChem - http://www.highchem.com/
Software-KnowItAll Acadrmic - http://www.knowitall.com/academic/welcome.html
Software-MarvinSketch - http://www.chemaxon.com/products/marvin/
Software-pElement - http://www.crystalmountainsoftware.com/pElementLearnMore.html
Software-REACT - http://www.chemicalsoft.com/
Software-Sicyon - http://www.sicyon.com/
Software-Students' Guide - http://sites.google.com/site/chemistryfreeware/home
Software-WinPLT - http://www.chem.wisc.edu/areas/reich/plt/winplt.htm
Spectroscopy Now - http://www.spectroscopynow.com/view/index.html
Tools-Orbitron - http://winter.group.shef.ac.uk/orbitron/
Tools-Sigma - http://www.sigmaaldrich.com/technical-service-home/web-tool-box.html
Tools-SIS - http://sis.nlm.nih.gov/chemical.html
Tools-STN Family - http://www.cas.org/training/stn
Trimark Publications - http://www.trimarkpublications.com/
Tutorial-Chemogenesis - http://www.meta-synthesis.com/webbook.html
Tutorial-DynaFit - http://www.biokin.com/dynafit/examples/index.html
Tutorial-Lewis Dot Structures - http://www.science.uwaterloo.ca/~cchieh/cact/c120/dotstruc.html
Tutorial-Thermo - http://mschemedge.com/Thermodynamics.htm
Tutorial-Valence Bond Theory & Hybrid Atomic Orbitals - http://www.science.uwaterloo.ca/~cchieh/cact/c120/hybrid.html
Tutorial-VSEPR - http://winter.group.shef.ac.uk/vsepr/howtodoit.html
Tutoring-Towson U - http://pages.towson.edu/ladon/
Unit Cell Basics - http://www.luc.edu/faculty/spavko1/minerals/prelim.htm
Usefulchem - http://usefulchem.blogspot.com/
Virtual ChemBook - http://www.elmhurst.edu/~chm/vchembook/
Web Guide - http://science.searchbeat.com/chemistry.htm
Wikipedia-Chemistry Portal - http://en.wikipedia.org/wiki/Portal:Chemistry
World of Chemistry - http://scienceworld.wolfram.com/chemistr

 

Jump To: Chemistry    Data Analysis  Modeling   Nomenclature  Organizations  Peptides  Molecular Biology

Chemistry-Alchemy

Ages Of Alchemy - http://icanseefar.tripod.com/home.html
Alchemical Emblems - http://www.levity.com/alchemy/galleries.html
Alchemy Web Ring - http://www.alchemylab.com/webring.htm
Alchemy Lab - http://www.alchemylab.com/
Alchemy Web Site - http://www.levity.com/alchemy/
Alchemy - http://www.levity.com/alchemy/index.html
Alchemy-Digital - http://www.alchemy-dc.com/
History of Chemistry - http://www.bluffton.edu/~bergerd/chem/chemhist.html
Natural Magick - http://homepages.tscnet.com/omard1/jportap1.html
Software-Merlin's Academy - http://www.synapses.co.uk/alchemy/

Jump To: Chemistry   Alchemy    Modeling   Nomenclature  Organizations  Peptides  Molecular Biology

Chemistry-Data Analysis

Cardoza's Dragon Magick - http://www.angelfire.com/nt/dragon9/
Comparison of data analysis programs - http://www.scientificweb.de/ncrunch/
Inferential Statistics - http://faculty.vassar.edu/lowry/webtext.html
KDNuggets Data Mining - http://www.kdnuggets.com/
Pitfalls of Data Analysis - http://my.execpc.com/~helberg/pitfalls/
Probability - http://www.cut-the-knot.org/probability.shtml
Random Numbers (pLab Project) - http://random.mat.sbg.ac.at/
Software-3D Grapher - http://www.romanlab.com/3dg/
Software-CoHort - http://www.cohort.com/
Software-DataFit - http://www.oakdaleengr.com/
Software-FitAll - http://www.fitall.com/
Software-Free Statistics - http://www.freestatistics.info/
Software-Graph Pad - http://www.graphpad.com/
Software-Insightful - http://spotfire.tibco.com/
Software-KaleidaGraph - http://www.synergy.com/
Software-Mathematica - http://www.wolfram.com/
Software-MathWorks - http://www.mathworks.com/products/matlab/
Software-Origin - http://www.originlab.com/
Software-SAS - http://www.sas.com/
Software-SciGraphica - http://scigraphica.sourceforge.net/
Software-STEPS - http://www.stats.gla.ac.uk/steps/base.html
Software-ViSta - http://sunsite.univie.ac.at/ViSta/
Statistics Resources - http://www.math.yorku.ca/SCS/StatResource.html
Tutorial-Excel Graphs - http://www.ncsu.edu/labwrite/res/gt/gt-menu.html
Tutorial-Excel Scientific (pdf) - http://academic.pg.cc.md.us/psc/Excel_booklet.pdf
Tutorial-Making Tables & Figures - http://abacus.bates.edu/~ganderso/biology/resources/writing/HTWtablefigs.html

Jump To:  Chemistry   Alchemy   Data Analysis    Nomenclature  Organizations  Peptides  Molecular Biology

Chemistry-Modeling

Animations-alpha-helix - http://www.umass.edu/microbio/chime/anim_xyz/anim.htm
Animations-G Protein Nanomachine - http://cti.itc.virginia.edu/~cmg/Demo/pdb/gprot/gprot.htm
Computational Chemistry List - http://www.ccl.net/chemistry/
Computational Geometry - http://compgeom.cs.uiuc.edu/~jeffe/compgeom/
Crystallography-Birkbeck College - http://www.bbk.ac.uk/biology/
Cytokines (COPE) - http://www.copewithcytokines.de/cope.cgi
Database-American Mineralogist - http://rruff.geo.arizona.edu/AMS/amcsd.php
Database-Cambridge - http://www.ccdc.cam.ac.uk/
Database-CATH (UCL) - http://www.cathdb.info/
Database-Crystallography Open - http://www.crystallography.net/
Database-Fire Annotated Residues - http://firedb.bioinfo.cnio.es/Php/FireDB.php
Database-IntAct - http://www.ebi.ac.uk/intact/main.xhtml
Database-Interacting Proteins (DIP) - http://dip.doe-mbi.ucla.edu/dip/Main.cgi
Database-Ligand-Gated Ion Channels - http://www.ebi.ac.uk/compneur-srv/LGICdb/LGICdb.php
Database-Minerals by Chemical Composition - http://webmineral.com/chemical.shtml
Database-MMDB Structures - http://www.ncbi.nlm.nih.gov/Structure/MMDB/mmdb.shtml
Database-MOLO - http://molo.concord.org/database/
Database-Nucleic Acid (NDB) - http://ndb-mirror-2.rutgers.edu/index.html
Database-PDB (RCSB) - http://www.rcsb.org/pdb/home/home.do
Database-PDB (Worldwide) - http://www.wwpdb.org/
Database-PDB Clean FIles - http://swift.cmbi.ru.nl/gv/service/judith/CLEANT/
Database-PDB sum - http://www.ebi.ac.uk/thornton-srv/databases/pdbsum/
Database-Peptaibol - http://peptaibol.cryst.bbk.ac.uk/home.shtml
Database-Pfam - http://pfam.sanger.ac.uk/
Database-PIR (UniProt) - http://www.uniprot.org/
Database-Procognate (Ligands) - http://www.ebi.ac.uk/thornton-srv/databases/procognate/
Database-Proteins in Membranes - http://opm.phar.umich.edu/
Database-SwissSidechain - http://swisssidechain.ch/
Database-TMbase - http://www.ch.embnet.org/software/tmbase/TMBASE_doc.html
Database-Zeolite Structures - http://www.iza-structure.org/databases/
DNA Animations - http://www.dnahelix.com/
Dopamine D4 - http://www.biopsychiatry.com/d4.htm
FGF Kinemages - http://www-personal.umich.edu/~lpt/fgf/fgf.htm
Geometry in Action - http://www.ics.uci.edu/~eppstein/geom.html
Growth Factor Research - http://www.growth-factors.net/
History of Molecular Visualization - http://www.umass.edu/microbio/rasmol/history.htm
Images-Graphics Gallery - http://www.accessexcellence.org/RC/VL/GG/
Macromolecular Museum - http://www.callutheran.edu/Academic_Programs/Departments/BioDev/omm/gallery.htm
Modeling (Mosberg) - http://mosberglab.phar.umich.edu/
Models-Molecular Models Co - http://www.molecularmodelscompany.com/Home.aspx
Models-Molymod - http://www.indigo.com/molecular_models/
Molecular Expressions - http://micro.magnet.fsu.edu/index.html
Molecular Universe - http://www.themolecularuniverse.com/
Molecules in Motion - http://www.moleculesinmotion.com./
PPS-Home - http://pps9900.cryst.bbk.ac.uk/
PPS-Home99 - http://pps99.cryst.bbk.ac.uk/index.html
PPS-Mail Index - http://pps9900.cryst.bbk.ac.uk/discuss/maillist.html
Protein Folding Lab (U of MI) - http://www.umich.edu/~protein/index.html
Proteopedia - http://proteopedia.org/wiki/index.php/Main_Page
Reciprocal Net - http://www.reciprocalnet.org/index.html
Reciprocal Net-Common Molecules - http://www.reciprocalnet.org/edumodules/commonmolecules/index.html
Resource-Peroxisome Proliferator Receptors - http://ppar.cas.psu.edu/
Software Database (Structural Biology) - http://www.ks.uiuc.edu/Development/biosoftdb/biosoft.cgi
Software-APBS - http://www.poissonboltzmann.org/apbs/
Software-ArgusLab - http://www.arguslab.com/
Software-AutoDock - http://autodock.scripps.edu/
Software-Balls & Sticks - http://www.softbug.com/toycrate/bs/index.html
Software-Bio3D - http://thegrantlab.org/bio3d/index.html
Software-BioByte - http://www.biobyte.com/index.html
Software-BioCoRE - http://www.ks.uiuc.edu/Research/biocore/
Software-Biodesigner - http://www.pirx.com/biodesigner/
Software-Bodil - http://users.abo.fi/bodil/about.php
Software-Chime Resources (UMass) - http://www.umass.edu/microbio/chime/index.html
Software-Chimera - http://www.cgl.ucsf.edu/chimera/index.html
Software-Chirality - http://petitjeanmichel.free.fr/itoweb.petitjean.html
Software-Cn3D - http://www.ncbi.nlm.nih.gov/Structure/CN3D/cn3d.shtml
Software-Diamond - http://www.crystalimpact.com/diamond/
Software-Dunbrack Lab - http://dunbrack.fccc.edu/Home.php
Software-Folding@Home - http://folding.stanford.edu/
Software-Force Field Explorer - http://dasher.wustl.edu/ffe/
Software-g0penMol - http://www.csc.fi/english/pages/g0penMol
Software-Genome@home - http://www.stanford.edu/group/pandegroup/genome/
Software-HADDOCK - http://www.nmr.chem.uu.nl/haddock/
Software-Jmol - http://jmol.sourceforge.net/
Software-Kinemage - http://kinemage.biochem.duke.edu/
Software-MathMol (NYU) - http://www.nyu.edu/pages/mathmol/quick_tour.html
Software-Mercury - http://www.ccdc.cam.ac.uk/Solutions/CSDSystem/Pages/Mercury.aspx
Software-Molecular Surface (Sanner) - http://mgl.scripps.edu/people/sanner/html/msms_home.html
Software-Molecular Workbench - http://mw.concord.org/modeler/
Software-Molegro - http://www.clcbio.com/products/molegro/
Software-MolFit - http://www.weizmann.ac.il/Chemical_Research_Support/molfit/
Software-MolIDE - http://dunbrack.fccc.edu/molide/
Software-MolScript - http://www.avatar.se/molscript/molscript.html
Software-MolSlides - http://www.umass.edu/microbio/chime/pe_beta/pe/protexpl/molview/index.htm
Software-MolSoft - http://www.molsoft.com/index.html
Software-NOC - http://noch.sourceforge.net/
Software-Open Babel - http://openbabel.org/wiki/Main_Page
Software-OpenEye - http://www.eyesopen.com/
Software-Orbital Viewer - http://www.orbitals.com/orb/ov.htm
Software-ORTEP (Windows) - http://www.chem.gla.ac.uk/~louis/software/ortep3/
Software-Petitjean - http://petitjeanmichel.free.fr/itoweb.petitjean.freeware.html
Software-PLATON - http://www.cryst.chem.uu.nl/platon/
Software-PyMOL - http://www.pymol.org/
Software-QuteMol - http://qutemol.sourceforge.net/
Software-R for Statistical Computing - http://www.r-project.org/
Software-RasMol EMail List - http://www.umass.edu/microbio/rasmol/listsub.htm
Software-RasMol Open - http://openrasmol.org/
Software-Rasmol - http://www.umass.edu/microbio/rasmol/index2.htm
Software-Raster3D - http://skuld.bmsc.washington.edu/raster3d/html/raster3d.html
Software-RasTop - http://www.geneinfinity.org/rastop/
Software-Schrödinger - http://www.schrodinger.com/
Software-SCWRL - http://dunbrack.fccc.edu/scwrl4/SCWRL4.php
Software-Serena - http://www.serenasoft.com/
Software-Shape - http://www.shapesoftware.com/
Software-Structural Biology - http://www.ks.uiuc.edu/Development/biosoftdb/
Software-SweetMollyGrace - http://rodomontano.altervista.org/engSweetMG.php
Software-Tripos - http://www.tripos.com/
Software-TRITON - http://www.ncbr.muni.cz/triton/triton.html
Software-VEGA - http://www.vegazz.net/
Software-VENUS - http://fujioizumi.verse.jp/visualization/VENUS.html
Software-VESTA - http://jp-minerals.org/en/
Software-Vienna RNA Secondary Structure - http://www.tbi.univie.ac.at/~ivo/RNA/
Software-Viewmol - http://viewmol.sourceforge.net/
Software-Vigyaan - http://www.vigyaancd.org/
Software-VMD (Beckman) - http://www.ks.uiuc.edu/Research/vmd/
Software-Wavefunction - http://www.wavefun.com/
Software-WPDB - http://www.sdsc.edu/pb/wpdb/wpdb.htm
Software-YASARA - http://www.yasara.org/
Structural Biology Planet - http://xtal.uvm.edu/
Structures Just For Chemists - http://www.biopsychiatry.com/structures/
Structures-Cool Molecules - http://www.stolaf.edu/depts/chemistry/mo/struc/
Structures-HIC-Up - http://xray.bmc.uu.se/hicup/
Structures-Inorganic Crystals - http://crystal.uvm.edu/index.php?id=264
Structures-JenaLib - http://jenalib.fli-leibniz.de/IMAGE.html
Structures-Ketamine - http://www.pitt.edu/~soriano/models/ketamine/ketamine.html
Structures-Ligand-Depot - http://ligand-depot.rutgers.edu/
Structures-MathMol - http://www.nyu.edu/pages/mathmol/library/
Structures-MSD Ligands - http://www.ebi.ac.uk/pdbe-srv/pdbechem/
Structures-NIH Lookup - http://cactus.nci.nih.gov/cgi-bin/lookup/search
Structures-PubChem - http://pubchem.ncbi.nlm.nih.gov/
Structures-World of Molecules - http://www.worldofmolecules.com/
Tools-3V Volume - http://www.molmovdb.org/cgi-bin/3v.cgi
Tools-CATH Wheels - http://www.biochem.ucl.ac.uk/bsm/cathwheels/
Tools-CBS Prediction - http://www.cbs.dtu.dk/services/
Tools-Dali (Fi) - http://ekhidna.biocenter.helsinki.fi/dali/start
Tools-DART - http://www.ncbi.nlm.nih.gov/Structure/lexington/lexington.cgi?cmd=rps
Tools-Dockground - http://dockground.bioinformatics.ku.edu/
Tools-Docking (GrammX) - http://vakser.bioinformatics.ku.edu/resources/gramm/grammx
Tools-Fold Recognition (UCLA-DOE) - http://www.doe-mbi.ucla.edu/Services/FOLD/
Tools-PDB_Hydro - http://lorentz.immstr.pasteur.fr/pdb/frozen_submission.php
Tools-Peptide Patterns (PIR) - http://pir.georgetown.edu/pirwww/search/patmatch.html
Tools-Phyre - http://www.sbg.bio.ic.ac.uk/~phyre/
Tools-Pisces - http://dunbrack.fccc.edu/PISCES.php
Tools-PolyView 3D - http://polyview.cchmc.org/polyview3d.html
Tools-PRINTS - http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS/
Tools-PROSPECT - http://compbio.ornl.gov/structure/prospect/
Tools-Quaternary Structure Prediction - http://mericity.com/
Tools-Ramachandran Plot Server - http://swift.cmbi.kun.nl/swift/servers/modrama-submit.html
Tools-SBASE Domain Library - http://hydra.icgeb.trieste.it/sbase/
Tools-Signal Peptide Server - http://www.cbs.dtu.dk/services/SignalP/
Tools-Swiss Model Workspace - http://swissmodel.expasy.org/workspace/index.php
Tools-SWISS-MODEL - http://swissmodel.expasy.org/
Tools-TMHMM (TM's) - http://www.cbs.dtu.dk/services/TMHMM-2.0/
Tools-Validation Server (RCSB) - http://rcsb-deposit.rutgers.edu/validate/
Tools-VAST - http://www.ncbi.nlm.nih.gov/Structure/VAST/vast.shtml
Tools-Verify_3D - http://nihserver.mbi.ucla.edu/Verify_3D/
Topology Cartoons-Modules - http://www.bork.embl-heidelberg.de/Modules/extra.html
Tutorial-Antibody Structure - http://www.callutheran.edu/Academic_Programs/Departments/BioDev/omm/epitope/frames/text.htm
Tutorial-Comparitive Protein Modeling - http://swissmodel.expasy.org/course/course-index.htm
Tutorial-Computational Organic - http://www.cmbi.kun.nl/tutorials/cheminf/mopac/comp.html#contents
Tutorial-Crystallography - http://webmineral.com/crystall.shtml
Tutorial-DNA Structure - http://www.umass.edu/microbio/chime/dna/index1.htm
Tutorial-Input FIles - http://www.cmbi.kun.nl/tutorials/cheminf/mopac/coord.html#exas
Tutorial-Knots in Proteins - http://www.umass.edu/microbio/chime/knots/index.htm
Tutorial-MathMol Hypermedia - http://www.nyu.edu/pages/mathmol/textbook/
Tutorial-Membranes - http://library.med.utah.edu/NetBiochem/membrane.htm
Tutorial-Modeling (CMBI) - http://swift.cmbi.ru.nl/teach/courses/index.html
Tutorial-MOPAC - http://www.ccl.net/cca/documents/dyoung/topics-orig/mopac.html
Tutorial-Opioid Receptors - http://www.opioids.com/receptors/
Tutorial-Protein Principles - http://www.landfood.ubc.ca/courses/fnh/301/protein/protprin.htm
Tutorial-Quantum In Molecular Modeling - http://www.cmbi.kun.nl/tutorials/cheminf/mopac/fred/ch5.html
Tutorial-RasMol - http://www.umass.edu/microbio/rasmol/rastut.htm
Tutorial-VMD - http://www.ks.uiuc.edu/Research/vmd/vmd-1.6/ug/node11.html
VSEPR (Dupuis & Berland) - http://www.faidherbe.org/site/cours/dupuis/vseprev.htm
VSEPR-Shapes of Molecules - http://www.chemistry.wustl.edu/~edudev/Vsepr/
World Index MolVis Resources - http://molvis.sdsc.edu/visres/index.html

 

Jump To: Chemistry   Alchemy   Data Analysis  Modeling    Organizations  Peptides  Molecular Biology

Chemistry-Nomenclature

Amino Acids & Peptides - http://www.chem.qmul.ac.uk/iupac/AminoAcid/
Biochemical Phosphorus - http://www.chem.qmul.ac.uk/iupac/misc/phospho.html
Carbohydrates - http://www.chem.qmul.ac.uk/iupac/2carb/
Carotenoids - http://www.chem.qmul.ac.uk/iupac/carot/
Chemical Nomenclature - http://sst.nsu.edu/chm221/notes/003lec2.htm
Cyclitols - http://www.chem.qmul.ac.uk/iupac/cyclitol/
Delta Convention - http://www.chem.qmul.ac.uk/iupac/hetero/De.html
Enzyme Kinetics - http://www.chem.qmul.ac.uk/iubmb/kinetics/
Enzymes Multiple Forms - http://www.chem.qmul.ac.uk/iubmb/misc/isoen.html
Enzymes - http://www.chem.qmul.ac.uk/iubmb/enzyme/
EpH Receptor & Ligands - http://depts.washington.edu/eph/
Folic Acid - http://www.chem.qmul.ac.uk/iupac/misc/folic.html
Fused Ring - http://www.chem.qmul.ac.uk/iupac/fusedring/
Glossary-Bioinorganic Glossary - http://www.chem.qmul.ac.uk/iupac/bioinorg/
Glossary-Class Names - http://www.chem.qmul.ac.uk/iupac/class/
Glossary-Medicinal Chemistry - http://www.chem.qmul.ac.uk/iupac/medchem/
Glossary-Physical Organic - http://www.chem.qmul.ac.uk/iupac/gtpoc/
Glycolipids - http://www.chem.qmul.ac.uk/iupac/misc/glylp.html
Glycoproteins - http://www.chem.qmul.ac.uk/iupac/misc/glycp.html
Hantzsch-Widman - http://www.chem.qmul.ac.uk/iupac/hetero/HW.html
Isotopical Modifications - http://www.chem.qmul.ac.uk/iupac/sectionH/
IUBMB - http://www.chem.qmul.ac.uk/iubmb/
IUPAC - http://www.iupac.org/
IUPAC-qmw - http://www.chem.qmul.ac.uk/iupac/index.html
Lipids - http://www.chem.qmul.ac.uk/iupac/lipid/
Multienzymes - http://www.chem.qmul.ac.uk/iubmb/misc/menz.html
Natural Products - http://www.chem.qmul.ac.uk/iupac/sectionF/
Nucleic Acid Branchpoints - http://www.chem.qmul.ac.uk/iubmb/misc/bran.html
Nucleic Acid Sequences (Unspecified) - http://www.chem.qmul.ac.uk/iubmb/misc/naseq.html
Nucleic Acid Symbols - http://www.chem.qmul.ac.uk/iupac/misc/naabb.html
Numerical Terms - http://www.chem.qmul.ac.uk/iupac/misc/numb.html
Peptide Hormones - http://www.chem.qmul.ac.uk/iubmb/misc/phorm.html
Phanes, Part I - http://www.chem.qmul.ac.uk/iupac/phane/
Polyimerized Polypeptides - http://www.chem.qmul.ac.uk/iupac/misc/polypep.html
Polynucleotide Conformation 1 - http://www.chem.qmul.ac.uk/iupac/misc/pnuc1.html
Polypeptide Conformations 1 & 2 - http://www.chem.qmul.ac.uk/iupac/misc/ppep1.html
Polysaccharide Conformations - http://www.chem.qmul.ac.uk/iupac/misc/psac.html
Radicals & Ions - http://www.chem.qmul.ac.uk/iupac/ions/
Spiro - http://www.chem.qmul.ac.uk/iupac/spiro/
Stereochemical - http://www.chem.qmul.ac.uk/iupac/stereo/
Steroids - http://www.chem.qmul.ac.uk/iupac/steroid/
Variable Valence (Lamba) - http://www.chem.qmul.ac.uk/iupac/hetero/Lm.html
Vitamin D - http://www.chem.qmul.ac.uk/iupac/misc/D.html
von Baeyer - http://www.chem.qmul.ac.uk/iupac/vonBaeyer/

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Chemistry-Organizations

ACS - http://portal.acs.org/portal/acs/corg/content
Alpha Chi Sigma - https://www.alphachisigma.org/
American Chemistry Council - http://www.americanchemistry.com/
American Institute of Chemical Engineers - http://www.aiche.org//
American Oil Chemists - http://www.aocs.org/
American Peptide Society - http://www.americanpeptidesociety.org/index.asp?
Assoc Biomolecular Resource Facilities - http://www.abrf.org/
Biochemical Society - http://www.biochemistry.org/
Chemical Educational Foundation - http://www.chemed.org/
Chemical Heritage Foundation - http://www.chemheritage.org/
Clinical Ligand Assay Society (CLAS) - http://www.clas.org/
European Peptide Society - http://www.eurpepsoc.com/
Institute for Chemical Educaion - http://ice.chem.wisc.edu/
Michigan Chemistry Council - http://www.michiganchemistry.com/index.asp
Molecular Graphics & Modeling - http://www.mgms.org/
Molecular Graphics & Modelling Society (Americas) - http://www.mgmsoa.org/
National Association of Chemical Distributors - http://www.nacd.com/
National Mole Day Foundation - http://www.moleday.org/
National Mole Day - http://www.hschem.org/Resources/nationalmoleday.htm
Protein Society - http://www.proteinsociety.org/
Royal Society of Chemistry - http://www.rsc.org/
Society for Biomolecular Sciences - http://www.slas.org/

Jump To: Chemistry   Alchemy   Data Analysis  Modeling   Nomenclature  Organizations    Molecular Biology

Chemistry-Peptides

Amino Acid Collection - http://www.micro.magnet.fsu.edu/aminoacids/
Amino Acid Repository - http://jenalib.fli-leibniz.de/IMAGE_AA.html
Amino Acid Structures - http://www.cem.msu.edu/~cem252/sp97/ch24/ch24aa.html
Antibodies Online - http://www.antibodies-online.com/
Antibody Resource - http://www.antibodyresource.com/
Database-Allergenic Proteins - http://fermi.utmb.edu/SDAP/sdap_ppm.html
Database-Antimicrobial Peptides - http://aps.unmc.edu/AP/main.php
Labome-ExactAntigen - http://www.labome.com/
Peptide Fragmentation - http://www.matrixscience.com/help/fragmentation_help.html
Peptide Nucleic Acid (PNA) - http://www.highveld.com/pages/pna.html
Peptide Resource - http://www.peptideresource.com/
Software-UltraScan - http://www.ultrascan.uthscsa.edu/
Tools-Abie - http://www.changbioscience.com/abie/abie.html
Tools-ePitope Informatics - http://www.epitope-informatics.com/Default.htm
Tools-Mascot - http://www.matrixscience.com/search_form_select.html
Tools-PROWL - http://prowl.rockefeller.edu/
Tutorial-Deamidation of Proteins - http://www.ionsource.com/Card/Deamidation/mono0001.htm
Tutorial-Proteins - http://www2.chemistry.msu.edu/faculty/reusch/VirtTxtJml/protein2.htm

Jump To: Chemistry   Alchemy   Data Analysis  Modeling   Nomenclature  Organizations  Peptides

Molecular Biology

@Genetics - http://atgenetics.com/genetics/
Action Bioscience - http://www.actionbioscience.org
Animal Rights - http://animalrights.net/
Animals-Flies - http://www.exploratorium.edu/exhibits/mutant_flies/mutant_flies.html
Bio Warfare - http://www.pbs.org/wgbh/pages/frontline/shows/plague/
Bioavailability - http://www.bioability.com/
Biocomputing Bibliography - http://www.csse.monash.edu.au/~lloyd/tildeBIB/
Bioinformatics Map - http://www.ebi.ac.uk/~bren/alberto_map.html
Bioinformatics (Boston) - http://www.bu.edu/bioinformatics/
Bioinformatics (EMBL) - http://www.embl.de/
Bioinformatics (Swiss Institute) - http://www.isb-sib.ch/
Bioinformatics (U Co) - http://www.colorado.edu/chemistry/bioinfo/
Bioinformatics (UMBER) - http://www.bioinf.manchester.ac.uk/dbbrowser/
Bioinformatics (Weizmann) - http://bip.weizmann.ac.il/index.html
Bioinformatics Factsheet - http://www.ncbi.nlm.nih.gov/About/primer/bioinformatics.html
Bioinformatics - http://www.bioinformatics.org/
Bio-Link - http://www.bio-link.org/home/
Biological Sciences (Cambridge) - http://www.bio.cam.ac.uk/
Biology Project (U Az) - http://www.biology.arizona.edu/
BioMed Net - http://www.bmn.com
BioSpace-Biosciences Hub - http://www.biospace.com/
Biotech U - http://www.biotechu.com/
Cell & Molecular Biology Resources - http://www.cellbio.com/
Cloning Fact Sheet - http://www.ornl.gov/sci/techresources/Human_Genome/elsi/cloning.shtml
Database-Biocatalysis & Biodegradation (MN) - http://umbbd.ethz.ch/
Database-Cell Centered Images - http://ccdb.ucsd.edu/CCDBWebSite/index.html
Database-Codon Usage - http://www.kazusa.or.jp/codon/
Database-DNA (EBI) - http://www.ebi.ac.uk/
DataBase-DNA EST (NIH) - http://www.ncbi.nlm.nih.gov/dbEST/index.html
Database-Entrez - http://www.ncbi.nlm.nih.gov/books/NBK3837/
Database-Gene Cards - http://www.genecards.org/index.shtml
Database-Genetic Assoc - http://geneticassociationdb.nih.gov/cgi-bin/index.cgi
Database-HGV - http://hgvbase.cgb.ki.se/
Database-Kyoto Gene Encyclopedia - http://www.genome.jp/kegg/kegg.html
Database-miRBase - http://www.mirbase.org/
Database-Mutant Mouse - http://www.mmrrc.org/
Database-Noncoding RNA - http://biobases.ibch.poznan.pl/ncRNA/
Database-Nucleic Acids - http://ndbserver.rutgers.edu/
Database-PCR Primer Sets - http://www.realtimeprimers.org/
Database-Rfam - http://rfam.sanger.ac.uk/
Databases-Medicinre & Molecular Biology - http://www.meddb.info/index.php.en?cat=8&subcat=30
Database-SNP (Japan) - http://snp.ims.u-tokyo.ac.jp/
Database-SNP - http://www.ncbi.nlm.nih.gov/snp?db=snp
Database-SRS (EMBL) - http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+srsq2+-noSession
Database-WormBase (Sanger) - http://www.wormbase.org/
DNA Forensics - http://www.ornl.gov/sci/techresources/Human_Genome/elsi/forensics.shtml
DNA Interactive - http://www.dnai.org/index.html
DNA Learning Center - http://www.dnalc.org/
Entrez - http://www.ncbi.nlm.nih.gov/sites/gquery
Eugenics Archive - http://www.eugenicsarchive.org/eugenics/
European Nuclide Archive - http://www.ebi.ac.uk/ena/
FAS Center-Ststems Biology - http://sysbio.harvard.edu/csb/
Fixing Proteomics - http://www.fixingproteomics.org/
Genamics - http://genamics.com/
Gene Chip-Brown Lab - http://brownlab.stanford.edu/Pat_Brown_Lab_Home_Page/Home.html
Gene Chips & Software - http://www.psrg.lcs.mit.edu/genechips/bibliography.html
Gene Splicing - http://www.technologynetworks.com/RNAi/index.aspx
Gene2Music - http://www.mimg.ucla.edu/faculty/miller_jh/gene2music/home.html
Gene-FGFR2 - http://www.ncbi.nlm.nih.gov/gene?db=gene&cmd=Retrieve&dopt=Graphics&list_uids=2263
GeneMap'98 - http://www.ncbi.nlm.nih.gov/genemap/
Genetic Science Learning Center - http://learn.genetics.utah.edu/
Genetics Home Reference - http://ghr.nlm.nih.gov/ghr/page/Home;jsessionid=289E297D522F8376ADCAF316072A04F6
Genetics-Revolution in Progress - http://history.nih.gov/exhibits/genetics/
Genome Viewer - http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi?chr=hum_chr.inf&query
Genome-Human - http://www.ncbi.nlm.nih.gov/genome/guide/human/
GenomeNet - http://www.genome.jp/
GenomeWeb - http://www.genomeweb.com/
Genomics Glossaries - http://genomicglossaries.com/
Human Protein Atlas - http://www.proteinatlas.org/
Human Transcript Map - http://www.ncbi.nlm.nih.gov/science96/
Internet for the Molecular Biologist - http://www.horizonpress.com/gateway/iftmb.html
Just Bio - http://www.justbio.com/
Microarray World - http://www.microarrayworld.com/
microRNA Targets (Sloan-Kettering) - http://cbio.mskcc.org/mirnaviewer/
miRBase (Targets) - http://www.ebi.ac.uk/enright-srv/microcosm/htdocs/targets/v5/
Molecular Biology Jump Station - http://www.horizonpress.com/gateway/
Molecular Biology Links (jp) - http://www.yk.rim.or.jp/~aisoai/index.html
Molecular Biology Resources(ANSELM) - http://www.anselm.edu/homepage/jpitocch/resmol.html
Molecular Biology-Stockholm - http://www.su.se/mbw/
Molecular Science Student Workbench - http://medsocnet.ncsa.illinois.edu/MSSW/
Mouse Genome Informatics - http://www.informatics.jax.org/
Mouse Proteome Project - http://tap.med.utoronto.ca/mts/
National Resource for Biomedical Supercomputing - http://www.nrbsc.org/
NIH-Biotechnology Activities - http://oba.od.nih.gov/oba/index.html
PLoS Computational Biology - http://www.ploscompbiol.org/home.action
Protocol Online - http://www.protocol-online.org/
Protocols-Neuroscience - http://www.protocol-online.org/prot/Neuroscience/
Protocols-Promega - http://www.promega.com
Rat Behavior & Biology - http://www.ratbehavior.org/
RNA World - http://www.imb-jena.de/RNA.html
RNAi Consortium ( Broad) - http://www.broadinstitute.org/rnai/trc/lib
RNAi Web - http://www.rnaiweb.com/
SiRNA Users Guide - http://www.rockefeller.edu/labheads/tuschl/sirna.html
SNPedia - http://www.snpedia.com/index.php?title=SNPedia
Software- Open Bioinformatics Foundation - http://www.open-bio.org/wiki/Main_Page
Software-ALSE (Motifs) - http://alse.cs.hku.hk/
Software-AnnHyb - http://www.bioinformatics.org/annhyb/
Software-Biosoft - http://www.premierbiosoft.com/
Software-BIRCH - http://home.cc.umanitoba.ca/~psgendb/
Software-CLC Bio - http://www.clcbio.com/
Software-Crosslink - http://ab.inf.uni-tuebingen.de/software/crosslink/welcome.html
Software-Cybertory - http://www.attotron.com/cybertory/
Software-Cytoscape - http://www.cytoscape.org/
Software-DNA Star - http://www.dnastar.com/
Software-DNALinux - http://dnalinux.com/index.php?option=com_frontpage&Itemid=1
Software-DNATools - http://www.crc.dk/dnatools/
Software-ET Viewe - http://mammoth.bcm.tmc.edu/traceview/index.html
Software-Fast PCR - http://primerdigital.com/fastpcr.html
Software-Geneious - http://www.geneious.com/
Software-GeneStudio - http://www.genestudio.com/
Software-Genome Analysis - http://genome.sourceforge.net/
Software-Gepsoft - http://www.gepsoft.com/index.htm
Software-Goodnight - http://www.gsoftnet.us/GSoft.html
Software-HMMER - http://hmmer.janelia.org/
Software-J Craig Venter - http://www.jcvi.org/cms/research/software/
Software-MB DNA Analysis - http://www.molbiosoft.de/
Software-MBI - http://www.oligo.net/
Software-MiraiBio - http://www.miraibio.com/
Software-Molecular Biology - http://www.cbs.dtu.dk/biolinks/software.php
Software-PerlPrimer - http://perlprimer.sourceforge.net/
Software-PHIRE (LoGT) - http://www.agr.kuleuven.ac.be/logt/PHIRE.htm
Software-Pise - http://www.pasteur.fr/recherche/unites/sis/Pise/
Software-PyMood - http://allometra.com/
Software-Redasoft - http://www.redasoft.com/
Software-RNAhybrid - http://bibiserv.techfak.uni-bielefeld.de/rnahybrid/
Software-Seqtools - http://www.seqtools.dk/seqtools.htm
Software-Staden Package - http://staden.sourceforge.net/
Software-STORM (LoGT) - http://www.agr.kuleuven.ac.be/logt/STORM.htm
Software-Vmatch - http://www.vmatch.de/
Tools-ABIM - http://sites.univ-provence.fr/~wabim/english/logligne.html
Tools-Biology Workbench - http://workbench.sdsc.edu/
Tools-BioToolkit - http://www.changbioscience.com/biotoolkit.html
Tools-BLAST (NCBI) - http://www.ncbi.nlm.nih.gov/blast/Blast.cgi
Tools-CODEHOP - http://blocks.fhcrc.org/blocks/codehop.html
Tools-COG - http://www.ncbi.nlm.nih.gov/COG/
Tools-Divide-& Conquer Alignment - http://bibiserv.techfak.uni-bielefeld.de/dca/
Tools-DNA Translation - http://web.expasy.org/translate/
Tools-ENDEAVOUR - http://homes.esat.kuleuven.be/~bioiuser/endeavour/endeavour.php
Tools-Ensembl - http://useast.ensembl.org/index.html
Tools-EST Analyzer - http://diana.pcbi.upenn.edu/cgi-bin/est_ph.cgi
Tools-Fasta3 (EMBL) - http://www.ebi.ac.uk/Tools/sss/fasta/
Tools-FirstEF - http://rulai.cshl.org/tools/FirstEF/
Tools-Gene (Entrez) - http://www.ncbi.nlm.nih.gov/gene?db=gene
Tools-GeneFisher (PCR Design) - http://bibiserv.techfak.uni-bielefeld.de/genefisher2/
Tools-GoMiner - http://discover.nci.nih.gov/gominer/
Tools-iHOP - http://www.ihop-net.org/UniPub/iHOP/
Tools-microInspector - http://mirna.imbb.forth.gr/microinspector/
Tools-microTest - http://diana.pcbi.upenn.edu/cgi-bin/micro_t.cgi
Tools-MirTif - http://mirtif.bii.a-star.edu.sg/
Tools-NEBcutter - http://tools.neb.com/NEBcutter2/index.php
Tools-Palindrome Utility - http://www.aridolan.com/pfuseq/pfuseq.aspx
Tools-Pfam (St. Louis) - http://pfam.janelia.org/
Tools-RegRNA - http://regrna2.mbc.nctu.edu.tw/
Tools-Research Sites - http://www.yk.rim.or.jp/~aisoai/molbio.html
Tools-Restriction Mapper - http://www.restrictionmapper.org/
Tools-Ribosomal Project II - http://rdp.cme.msu.edu/
Tools-SeWeR - http://www.bioinformatics.org/sewer/
Tools-SGC - http://www.thesgc.org/
Tools-snoGPS - http://lowelab.ucsc.edu/snoGPS/
Tools-TarBase - http://www.diana.pcbi.upenn.edu/tarbase.html
Tools-Time Tree - http://www.timetree.org/
Tools-Tree of Life - http://tolweb.org/tree/phylogeny.html
Tools-tRNAscan - http://lowelab.ucsc.edu/tRNAscan-SE/
Tools-VecScreen - http://www.ncbi.nlm.nih.gov/VecScreen/VecScreen.html
Tools-WatCut - http://watcut.uwaterloo.ca/watcut/watcut/template.php
Tools-Webcutter - http://www.firstmarket.com/cutter/cut2.html
Tools-WebLogo Sequences - http://weblogo.berkeley.edu/
Trans-NIH Mouse Initiative - http://www.nih.gov/science/models/mouse/
Tutorial-DNA Database - http://ndbserver.rutgers.edu/NDB/structure-finder/tutorials/index.html
Tutorial-DNA from the Beginning - http://www.dnaftb.org/
Tutorial-DNA Seen By Coder - http://ds9a.nl/amazing-dna/
Tutorial-Molecular Genetics (DOE) - http://www.ornl.gov/sci/techresources/Human_Genome/publicat/primer/toc.html
Tutorial-Multiple Alignments - http://bioinformatics.weizmann.ac.il/~pietro/Making_and_using_protein_MA/
Tutorial-Online Analysis Tools - http://molbiol-tools.ca/
Tutorial-Protein Sequence Analysis - http://www.bioinf.manchester.ac.uk/dbbrowser/bioactivity/prefacefrm.html
Tutorial-Sequence Analysis (SADR) - http://bibiserv.techfak.uni-bielefeld.de/sadr/
Understanding Genetics - http://www.thetech.org/exhibits/online/ugenetics/
UniGene-Human - http://www.ncbi.nlm.nih.gov/unigene?db=unigene
Wikipedia-Molecular Biology Portal - http://en.wikipedia.org/wiki/Portal:Molecular_and_Cellular_Biology

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Molecular & Behavioral Neuroscience Institute
The University of Michigan

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