SI 508 Networks: Theory and Applications

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software tools

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Schedule

Fall 2007:

Tuesdays
508 & 708 together
4-5:30pm in WH412

Thursdays
708 10:30am -12pm in the Complex Systems Commons (WH 317A)

508 4-5:30pm in the DIAD lab

Office hour:
508/708 Mondays 3-4pm




SI 508 & 708 syllabus

 

 

This course will cover topics in network analysis, from social networks to applications in information networks such as the internet. We will introduce basic concepts in network theory, discuss metrics and models, use software analysis tools to experiment with a wide variety of real-world network data, and study applications to areas such as information retrieval. For their final project, the students will apply the concepts learned in class to networks of interest to them.

Compared to the PhD level course (SI 708), SI 508 will have several in-class lab sessions where we will be analyzing data sets together. It will focus more on applications to the WWW, tagging and blogging, as well as co-authorship and citation networks. It will focus less on mathematical models and algorithms.

SI 708 will focus more on recent research in the area of complex networks, and may cover these additional topics: network evolution, p* models, strategic network formation, general graph search algorithms, flow, game theory or epidemic modeling.

SI508/708 will have a joint lecture on Tuesdays 4-5:30.

Check out a sample of the winter'07 student projects for inspiration.
Can't wait for class to start? Experiment with some of the online demos.

Below is a very preliminary syllabus that is sure to change substantially. It's just here for those of you demanding it.

9/4

basic network metrics

508: Pajek Ch1: Looking for social structure
708: Jackson Ch.1: Introduction

9/6

508 lab: intro to Pajek
708 lab: intro to Pajek


508/708: Pajek CH2: Attributes and Relations

508/708 Pajek documentation
508/708 Graphviz documentation

708 start reading: Jackson Ch.2: Representing and measuring networks
&
Jackson Ch.3: Empirical background on social and economic networks

9/11 centrality and other network metrics
508/708: Wayne E. Baker and Robert R. Faulkner, The Social Organization of Conspiracy: Illegal Networks in the Heavy Electrical Equipment Industry, American Sociological Review, Vol. 58, No. 6 (Dec, 1993)
508/708: Noah E. Friedkin, 'Structural Bases of Interpersonal Influence in Groups: A Longitudinal Case Study, American Sociological Review, Vol. 58, No. 6 (Dec, 1993)
508 optional/708 optional Wasserman & Faust Ch5: Centrality and prestige
708: continue reading Jackson Ch 2 & 3
9/13
PS 1
508 lab:: centrality
708:: matrix representations, eigenvector centrality measures
508: Pajek Ch. 6: Center and Periphery
508: Pajek Ch. 9 : prestige
708: continue reading Jackson Ch 2 & 3
9/18
clustering
Milgram's small world experiment
random graphs
Watts-Strogatz small world model
 

508/708 Watts & Strogatz, 'Collective Dynamics of Small World Networks', Nature, 1998
508/708 Travers and Milgram, 'An experimental study of the small world problem'
708: MEJN 6: The Small World Model

9/20
PS 2
508 lab: small world phenomenon in real-world networks & simulations

708: random graphs

708: Jackson Ch.4: Random Graph Based Models of Networks
9/25 Zipf's Law & fat tails
preferential attachment
508: L. Adamic, Zipf, Power-laws, and Pareto - a ranking tutorial
708: Power laws, Pareto distributions and Zipf's law, M. E. J. Newman, Contemporary Physics 46, 323-351 (2005).
9/27
PS 3
508 lab: fitting power-laws, growing networks

708: network growth models
508 

MEJN VII: Models of network growth
508/708 Barabasi and Albert, 'Emergence of scaling in random networks'
508/708 optional: Topology of evolving networks: local events and universality, Reka Albert, Albert-Laszlo Barabasi, Phys. Rev. Lett. 85, 5234-5237 (2000) (used in Pajek)
508/708 optional: Winners don't take all: Characterizing the
competition for links on the web
David M. Pennock, Gary W. Flake, Steve Lawrence, Eric J. Glover, and C. Lee Giles, PNAS, April 16, 2002, vol. 99, no. 8
708: Jackson Ch. 5: Growing Random networks
10/2
graph traversal

708: Barrat et al.: The architecture of complex weighted networks
708: Kleinberg and Tardos, 'Network Flow' in 'Algorithm Design'

10/4
PS 4
508 lab: network analysis with GUESS
708 lab:: network analysis with GUESS
508/708 Eytan Adar, GUESS: A Language and Interface for Graph Exploration, CHI 2006
508/708 GUESS documentation
10/9
project proposal due

homophily
exploratory analysis of online communities

508/708 S. Feld. Social structural determinants of similarity among associates. American Sociological Review, 47, 1982.
508/708 optional: L. A. Adamic and E. Adar. Friends and neighbors on the web. Social Networks, 25(3):211{230, 2003.
508/708 optional: L. A. Adamic, O. Buyukkokten, and E. Adar. A social network caught in the web. First Monday, 8(6), June 2003.
508/708 optional; L. A. Adamic and N. Glance. The political blogosphere and the 2004 US election: Divided they blog. In Proceedings of LinkKDD-2005, 2005.
10/11
PS 5
508 lab: citation, co-authorship, patent networks
708:: network flow

M. E. J. Newman, Who is the Best Connected Scientist? A Study of Scientific Coauthorship Networks.

Gavin Clarkson: Patent Informatics for Patent Thicket Detection
708: Kleinberg & Tardos 'Network flow' in 'Algorithm Design'

10/16 ---- break ----  
10/18
PS 6

708: NetLogo tutorial given by Eytan Bakshy

508: guest lecture by Puneet Manchanda

 
10/23
community structure
Pajek Ch3: cohesive subgroups
Pajek Ch5: affiliations
Girvan & Newman: Community structure in social and biological networks, PNAS | June 11, 2002 | vol. 99 | no. 12 | 7821-7826
10/25
midterm due
508 lab: community structure
708: community finding algorithms

508 Pajek Ch. 12: blockmodels
708 Mark Newman: Modularity and community structure in networks
708 Newman & Leicht: Mixture models and exploratory analysis in networks, PNAS (2007).

10/30 search 508/708:J. M. Kleinberg. Navigation in a small world. Nature, 406:845, 2000.
508/708: D. J. Watts, P. S. Dodds, and M. E. J. Newman. Identity and search in social networks. Science, 296:1302-1305, 2002.
708: Jackson 7.2: Search and navigation on networks
11/1
PS 7
508 lab: search, brokers & bridges
708: search

 

508 Pajek Ch7: brokers and bridges
508 optional/708 optional
David Liben-Nowell, Jasmine Novak, Ravi Kumar, Prabhakar Raghavan and Andrew Tomkins. Geographic routing in social networks, PNAS | August 16, 2005 | vol. 102 | no. 33 | 11623-11628


508 optional/708 optional: L. A. Adamic and E. Adar. How to search a social network. Social Networks, 27(3):187-203, 200 5.

708: Adamic et al. 'Search in power law networks'
708 optional : J. Kleinberg. Small-world phenomena and the dynamics of information.Advances in Neural Information Processing Systems (NIPS), 14, 2001.

 

11/6 ranking algorithms and information retrieval
the Web as a graph
Broder et al, Graph Structure in the Web, 9th WWW conference, Amsterdam, May 2000.
F. Menczer: Mapping the semantics of Web text and links. in IEEE Internet Computing 9(3): 27-36, May/June 2005
L. Page, S. Brin, R. Motwani, and T. Winograd. The pagerank citation ranking: Bringing order to the web. Technical report, Stanford Digital Library Technologies Project, 1998.  
G. Erkan and D. R. Radev. Lexrank: Graph-based lexical centrality as salience in text summarization. Journal of Artificial Intelligence .
J. M. Kleinberg. Authoritative sources in a hyperlinked environment. Journal of the ACM, 46(5):604-632, 1999.
11/8
mid-project report due
508 lab: the web as a graph
708: epidemic spread on networks
708: Jackson 7.1: Diffusion through networks: spread of information and disease
11/13 information diffusion

508/708 Davis, Gerald F., Yoo, Mina, Baker, Wayne E.
The Small World of the American Corporate Elite, 1982-2001 Strategic Organization 2003 1: 301-326
508/708 Mark Granovetter, The Strength of Weak Ties, The American Journal of Sociology, Vol. 78, No. 6 (May, 1973), 1360-1380.
508/708 optional: Ron Burt, "Structural holes and good ideas"
508/708 optional:Aral & Van Alstyne: "Network structure & Information Advantage"
508/708 optional: Lazer: "The Parable of the Hare and the Tortoise: Small Worlds, Diversity, and System Performance"

11/15
PS 8
508 lab: diffusion
708:: learning and opinion formation
508 Pajek Ch 8: diffusion
708: Jackson Ch 8: Learning and networks
708 optional : Holme & Newman, Nonequilibrium phase transition in the coevolution of networks and opinions
11/20
network robustness

508/708: Albert et al. Error and attack tolerance of complex networks, Nature 406, 378 - 382 (2000)
508 optional/708 optional: Kinney et al: Modeling cascading failures in the North American power grid Eur. Phys. J. B 46, 101107 (2005)

11/22 thanksgiving break ---
11/27 networks over time 508/708: Guimera et al. Team Assembly Mechanisms Determine Collaboration Network Structure and Team Performance, Science 29 April 2005: Vol. 308. no. 5722, pp. 697 - 702
508/708: Backstrom et al. Group formation in large social networks: membership, growth, and evolution, KDD 2006
508/708: Leskovec et al. Graphs over time: densification laws, shrinking diameters and possible explanations
11/29
PS 9
508 lab: tagging networks 508 S. A. Golder and B. A. Huberman. Usage patterns of collaborative tagging systems. Journal of Information Science, 32(2):198{208, 2006.
508 optional
R. Lambiotte and M. Ausloos. Collaborative tagging as a tripartite network , Dec 2005.
508 optional C. Cattuto, V. Loreto, and L. Pietronero. Collaborative tagging and semiotic dynamics, May 2006.
708: Jackson Ch.6 Strategic network formation
708: games on networks, strategic network formation
12/4 project presentations  
12/6 project presentations  
12/11 project presentations