Kang Ning

Department of Pathology
University of Michigan
Ann Arbor, MI

Tel: +1 - 7346140302
Email: kning at umich dot edu

Homepage: http://www-personal.umich.edu/~kning

Resume:pdf

[Education] [Research] [Publications] [Links]


Education

07-2003 ~ 05-2008: PhD student, Department of Computer Science of School of Computing of National University of Singapore.

08-1998 ~ 07-2003: undergraduate student, Department of of Computer Science & Technology of University of Science and Technology of China .

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Research

I am now a Research Fellow at Umiversity of Michigan with Alexey I. Nesvizhskii.

My research areas include Computational Biology, Bioinformatics, and Related Areas.

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Publications

Journals:

  • Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong and Limsoon Wong. Protein Complex Prediction from PPI Networks using Indirect Interactions. Journal of Bioinformatics and Computational Biology (Special issue) (2008).
  • Kang Ning, Nan Ye and Hon Wai Leong. Better Preprocess and Anti-symmetric Computational Model for Algorithm for Peptide Sequencing by Tandem Mass Spectrometry. Journal of Bioinformatics and Computational Biology (Special issue) (2008).
  • Ket Fah Chong, Kang Ning, Hon Wai Leong and Pavel Pevzner. Modeling and Characterization of Multi-Charge Mass Spectra for Peptide Sequencing. Journal of Bioinformatics and Computational Biology, Vol. 4, No. 6 (2006) 1329-1352. (paper)
  • Kang Ning and Hon Wai Leong. Towards a Better Solution to the Shortest Common Supersequence Problem: The Deposition and Reduction Algorithm. BMC Bioinformatics 2006, 7 (Suppl 4): S12. (paper)
  • Kang Ning, Kwok Pui Choi, Hon Wai Leong and Louxin Zhang. A Post Processing Method for Optimizing Synthesis Strategy for Oligonucleotide Microarrays. Nucleic Acids Research, 33 (2005): e144. (paper)

Peer reviewed conferences:

  • Kang Ning, Hoong Kee Ng and Hon Wai Leong. An Accurate and Efficient Algorithm for Peptide and PTM Identification by Tandem Mass Spectrometry. GIW 2007, December/2007.
  • Kang Ning, Hon Wai Leong. Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocess and Anti-symmetric Computational Model. CSB 2007, August/2007.
  • Hon Nian Chua, Kang Ning, Wing-Kin Sung, Hon Wai Leong, Limsoon Wong. A Novel algorithm for Protein Complex Prediction based on PPI Networks. CSB 2007, August/2007.
  • Hoong Kee Ng, Kang Ning and Hon Wai Leong. A New Approach for Similarity Queries of Biological Sequences in Databases. PAKDD 2007, May/2007.
  • Kang Ning, Ket Fah Chong and Hon Wai Leong. De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags. APBC 2007, January/2007.
  • Kang Ning and Hon Wai Leong. The distribution and deposition algorithm for the multiple oligo nucleotide arrays. GIW 2006, December/2006.
  • Kang Ning, Hoong Kee Ng and Hon Wai Leong. PepSOM: An algorithm for peptide identification by tandem mass spectrometry based on SOM. GIW 2006, December/2006.
  • Kang Ning, Hoong Kee Ng and Hon Wai Leong. Finding Patterns in Biological Sequences by Longest Common Subsequences and Shortest Common Supersequences. BIBE 2006, October/2006.
  • Kang Ning and Hon Wai Leong. Towards a Better Solution to the Shortest Common Supersequence Problem: A Post Processing Approach. SCBB06 of IMSCCS06, June/2006. ISBN 0-7695-2581-4, Vol.1, Page 84-90.
  • Kang Ning, Hon Nian Chua. Automated Identification of Protein Classification and Detection of Annotation Errors in Protein Databases using Statistical Approaches. KDLL 2006, April/2006. LNBI 3886, 123-138.
  • Kang Ning, Ket Fah Chong, Hon Wai Leong. A Database Search Algorithm for Identification of Peptides with Multiple Charges using Tandem Mass Spectrometry. BioDM 2006, April/2006. LNBI 3916, 2-13.
  • Ket Fah Chong, Kang Ning, Hon Wai Leong and Pavel Pevzner. Characterization of multi-charge mass spectra for peptide sequencing. APBC 2006, February/2006. ISBN 1-86094-623-2, Page 109-119.

Posters:

  • Kang Ning, Hoong Kee Ng, Xia Cao, Hon Wai Leong and Alexey I. Nesvizhskii. Two-phase Filtering Strategy for Identification of Peptide with Post-Translational Modifications. Poster, ASMS 2008, June/2008.
  • Kang Ning, Ket Fah Chong, Hon Wai Leong. De novo Peptide Sequencing for Multi-charge Mass Spectra based on Strong Tags. Poster, RECOMB 2006, April/2006.
  • Kang Ning, Hon Wai Leong. The distribution and deposition method for the multiple oligo nucleotide arrays. Poster, RECOMB 2006, April/2006.
  • NING Kang, CHOI Kwok Pui, LEONG Hon Wai and ZHANG Louxin. A Comparative Study of the Methods on Effective Synthesis of Oligo Nucleotides . Poster, APBC 2005, January/2005.

Services:

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Links

References

Bioinformatics Seminars - UM Bioinformatics Graduate Program

Learnings

Lectures and Courses in Bioinformatics

On-Line Biology Book

Bioinformatics Books

Dictionary of Genetic Terms

R Project

CPAN

Research

Worldwide Bioinformatics & Computational Biology Related Events

University of Michigan University Library

NCBI Homepage

DOEgenomes

Searches

SiteSeer

DBLP

Google Scholar

Personal

Some of my photos on Flickr and on Google

My Chinese blog

My friends websites

Francis Ng Hoong Kee's Homepage

Chong Ket Fah's Homepage

Other Links

OCEF

SlashDot

OSNews

lonely planet

Merriam-Webster's Online Dictionary

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