Chronis Lab


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Publications

JOURNAL PUBLICATIONS

1. Bazopoulou D., Chaudhury AR; Pantazis A., Chronis N., An automated compound screening for anti-aging effects on the function of C. elegans sensory neurons, Scientific Reports 7, Article number: 9403 (2017), doi:10.1038/s41598-017-09651-x.

 

2. Chaudhury, A., Insolera, R.; Hwang RD., Fridell, YW., Collins, C., Chronis, N., On chip cryo-anesthesia of Drosophila larvae for high resolution in vivo imaging applications, LAB ON A CHIP Volume: 17 Issue: 13 Pages: 2303-2322 Published: JUL 7 2017.

 

3. Sengupta, A., Hadjiiski, L., Chan, H.-P., Cha, K., Chronis, N. and Marentis, T. C. (2016), Computer-Aided Detection of Retained Surgical Needles from Postoperative Radiographs. Med. Phys., doi:10.1002/mp.12011, Volume: 44, Issue: 1, Pages: 180-191, Published: JAN 2017.

 

4. Gourgou E. and Chronis N. Chemically induced oxidative stress affects ASH neuronal function and behavior in C. elegans, Scientific Reports 6, Article number: 38147 (2016).

 

5. Hale L.A., Lee E.S., Pantazis A.K., Chronis N. and Sreekanth S.H., Altered sensory code drives juvenile to adult behavioral maturation in Caenorhabditis elegans, eNeuro 15 December 2016, ENEURO.0175-16.2016; DOI: https://doi.org/10.1523/ENEURO.0175-16.2016.

 

6. Chaudhury A., Pantazis A.K., Chronis N., An Image Contrast-Based Pressure Sensor, Sensors & Actuators: A. Physical Sensors and Actuators A: Physical, Volume 245, 1 July 2016, Pages 63-67.

 

7. C.R. Oliver, E. Gourgou, D. Bazopoulou, N. Chronis and A.J. Hart, On-Demand Isolation and Manipulation of C. Elegans by in Vitro Maskless Photopatterning, PLoS ONE, vol. 11, January 2016, DOI: 10.1371/journal.pone.0145935.

 

8. Leinwand, S.G., Yang, C.J., Bazopoulou, D., Chronis, N., Srinivasan, J., & Chalasani, S.H. (2015). Circuit mechanisms encoding odors and driving aging-associated behavioral declines in Caenorhabditis elegans. eLife, 4, e10181. http://doi.org/10.7554/eLife.10181.

 

9. Hadjiiski L., Marentis T.C., Chaudhury A.R., Rondon L., Chronis N. and Chan HP, Computer aided detection of surgical retained foreign object for prevention, Medical Physics 42, 1213 (2015).

 

10. Gulari M.N., Ghannad-Rezaie M., Novelli P., Chronis N., Marentis T.C., An Implantable X-Ray-Based Blood Pressure Microsensor for Coronary In-Stent Restenosis Surveillance and Prevention, Journal of Microelectromechanical Systems, Volume:24, Issue: 1, Page 50-61 (2015).

 

11. Gulari M.N., Tripathi A., Ghannad-Rezaie M. and Chronis N., An Optofluidic Lens Array Microchip for High Resolution Stereo Microscopy, Micromachines 2014, 5(3), 607-621.

 

12. Mishra B., Ghannad-Rezaie M.; Li J., Wang X., Hao Y., Ye B.; Chronis N.; Collins, C.A., Using microfluidics chips for live imaging and study of injury responses in Drosophila larvae, Journal of visualized experiments (JoVE), Issue:84, Pages:e50998, February 2014.

 

13. Tripathi A., Riddell J., and Chronis N., A Biochip with a 3D microfluidic architecture for trapping white blood cells, Sensors and Actuators B-chemical, Volume: 186, September 2013, p. 244-251.

 

14. Ghannad-Rezaie M., Wang X., Mishra B., Collins C. and Chronis N. Microfluidic chips for in vivo imaging of cellular responses to neural injury in Drosophila larvae, PLoS One. 2012;7(1):e29869. Epub 2012 Jan 23.

 

15. Ghannad-Rezaie M., Yang L., Garton H. and Chronis N. A Near Infrared Opto-mechanical Intracranial Pressure Microsensor, Journal of Microelectromechanical Systems, Vol. 21, No. 1, February 2012, p. 23-33.

 

16. Tripathi A. and Chronis N., A doublet microlens array for imaging micron-sized objects, J. Micromech. Microeng. Vol. 21, Number 10, doi:10.1088/0960-1317/21/10/105024 (2011).

 

17. Chokshi T.V., Bazopoulou D. and Chronis N., Probing the physiology of ASH neuron in Caenorhabditis elegans using Electric Current Stimulation, Applied Physics Letters 99, 053702 (2011).

 

18. Chokshi T.V., Bazopoulou D. and Chronis N., An automated microfluidic platform for calcium imaging of chemosensory neurons in Caenorhabditis elegans, Lab Chip. 10(20):2758-63 (2010).

 

19. Chronis N., Worm Chips: Microtools for C. elegans Biology, Lab Chip, 2010, 10, 432 - 437.

 

20. Ben-Yakar A., Chronis N. and Lu H., Microfluidics for the analysis of behavior, nerve regeneration, and neural cell biology in worms, Current Opinion in Neurobiology, Oct;19(5):561-7 (2009).

 

21. Tripathi A., Chokshi T.V., Chronis N., A high numerical aperture, polymer-based, planar microlens array, Optics Express, Vol. 17 Issue 22, pp.19908-19918 (2009).

 

22. Zimmer M., Gray J.M., Pokala N., Andy J. Chang A.J., Karow D.S., Marletta M.A., Hudson M.L., David B. Morton, Chronis N. and Bargmann C.I., Neurons Detect Increases and Decreases in Oxygen Levels Using Distinct Guanylate Cyclases, Neuron, Volume 61, Issue 6, 865-879, 26 March 2009.

 

23. Choskshi T.V., Ben-Yakar A. and Chronis N., CO2 and Compressive Immobilization of C. elegans on-chip, Lab Chip, 2009, 9, 151 - 157.

 

24. Guo S.X., Frederic Bourgeois F., Chokshi T., Durr N.J., Hilliard M.A., Chronis N. & Ben-Yakar A., Femtosecond laser nanoaxotomy lab-on-a-chip for in vivo nerve regeneration studies, Nature Methods, vol. 5 no 6., 531 - 533 (2008).

 

25. Lockery S., Lawton K., Doll J.C., Faumont S., Coulthard S., Thiele T., Chronis N., McCormick K., Goodman MB., Pruitt BL., Artificial dirt: Microfluidic substrates for nematode neurobiology and behavior, Journal of Neurophysiology, vol. 99: 3136-3143, (2008).

 

26. Chalasani S., Chronis N., Tsunozaki M., Gray J., Goodman M., Bargmann C., Dissecting a neural circuit for food-seeking behavior in Caenorhabditis elegans, Nature 450, 63-70 (2007).

 

27. Chronis N., Zimmer M., and Bargmann C.I., Microfluidics for in vivo imaging neuronal and behavioral activity in Caenorhabditis elegans, Nature Methods, vol.4 no.9, September 2007, p. 727-731.

 

28. Chang A.J., Chronis N., Karow D.S., Marletta M.A., Bargmann C.I, A Distributed Chemosensory Circuit for Oxygen Preference in C. Elegans, PLoS Biology Vol. 4, No. 9, (2006).

 

29. Chronis N. and Lee L.P, Electrothermally activated SU-8 Microgripper for Single Cell Manipulation, Journal of MicroelectroMechanical Systems, 2005, Volume 14, Issue 4, p.857- 863.

30. Jeong K.H., Liu G.L, Chronis N. and Lee L.P. Tunable Microdoublet Lens Array, Optics Express, Volume 12, May 2004, p. 2494-2500.

 

 31. Chronis N. and Lee L.P, Total-Internal Reflection based-Biochip utilizing a polymer-filled cavity with a micromirror sidewall, Lab Chip, 2004, 4, p.125-130.

 

32. Chronis N., Liu GL, Jeong KH, and Lee L.P., Tunable liquid-filled microlens array integrated with microfluidic network, Optics Express, Volume 11, September 2003, p.2370-78.

CONFERENCE PUBLICATIONS

1. G. Korompili, G. Kanakaris, C. Ampatis and N. Chronis, A Portable, Optical Scanning System for Large Field of View, High Resolution Imaging of Biological Specimens, Eurosensors 2017 Conference, Paris, France, 3–6 September 2017.

 

2. K. Misiakos, I. Raptis, A. Salapatas, M. Anastasopoulou, A. Malainou, N. Chronis and G. Jobst, "Monolithic Silicon Optical Microchips for Broad-Band Mach-Zehnder Interferometry and Highly Sensitive Label Free Immunosensing," Bio-MEMS and Medical Microdevices II Conference, Barcelona, , Spain, vol. 9518, May 2015, DOI: 10.1117/12.2179355.

 

3. Anastasopoulou M., Malainou A., Salapatas A., Chronis N., Papagerakis S., Jobst G., Raptis I. and Misiakos K., ‘An interferometric integrated microsystem for the label free detection of interleukins’, The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), St. Luis, USA, October 2014.

 

4. C.R. Oliver, E. Gourgou, D. Bazopoulou, N. Chronis and A.J. Hart, ‘Platform for In-Vitro Photo-Patterning of Whole Animal C. Elegans Assays and Behavior Control’, 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014, San Antonio, TX, pp. 2558-2559, October 2014.

 

5. Pantazis A.K., Papagerakis S., Papagerakis P. and Chronis N., ‘An optofluidic chip for studying mechanical deformation of cells’, The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), St. Luis, USA, October 2014.

 

6. Marentis T.C., Hadjiiski L., Chaudhury, A.R., Rondon, L., Chronis, N., Chan, H.P., ‘Surgical Retained Foreign Object (RFO) Prevention by Computer Aided Detection (CAD)’, SPIE Conference on Medical Imaging - Computer-Aided Diagnosis, San Diego, February 18-20, 2014.

 

7. Gulari M.N., Ghannad-Rezaie M., and Chronis N., ‘A Compact, Optofluidic System For Measuring Red Blood Cell Concentration,’ (Transducers) IEEE International Conference on Solid-State Sensors and Actuators, Barcelona, Spain, pp. 2552-2555, June 2013.

8. Ghannad-Rezaie M., Gulari M.N., Franco R.D.M., Shahzad M., and Chronis N., ‘A Powerless Optical Microsensor For Monitoring Intraocular Pressure In Keratoprosthetic Implants,’ (Transducers) IEEE International Conference on Solid-State Sensors and Actuators, Barcelona, Spain, June 2013.

9. Gulari M.N., Ghannad-Rezaie M., Novelli P., Chronis N. and Marentis T.C., An X-Ray Detectable Pressure Microsensor for Monitoring Coronary In-stent Restenosis, IEEE International Conference on Micro Electro Mechanical Systems (MEMS), January 2014, San Francisco, CA, p. 893 - 896.

 

10. Ghannad-Rezaie M., Gulari M.N., and Chronis N., A Powerless, Fabry-Perot Laser-based Pressure Microsensor, IEEE-EMBS Micro- and Nanoengineering in Medicine Conference, Ka’anapali, HI, December 2012.

 

11. Gulari M.N., Tripathi A., and Chronis N., "Microfluidic-Based Oil Immersion Lens for High Resolution Microscopy," The 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), Okinawa, Japan, pp. 49-51, October 2012.

 

12. A. Tripathi, T. C. Marentis, and N. Chronis, Microfrabricated instrument tag for the radiographic detection of retained foreign bodies during surgery, Proceedings of the SPIE, Volume 8313, pp. 83134H-83134H-8 (2012).


13. A. Tripathi, N. Chronis, A doublet microlens array for imaging of biological micron-size objects?, The 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences µTAS, 2011.


14. T.V. Chokshi, D. Bazopoulou, N. Chronis, An automated microfluidic platform for electrical stimulation of the nervous system of C. elegans, The 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences µTAS, 2011.

15. M. Ghannad-Rezaie, B. Mishra, C. Collins, N. Chronis, A microfluidic chip for immobilizing and in vivo imaging of Drosophila larva, The 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences µTAS, 2011.

16. A. Tripathi, N. Chronis, A white blood cell capturing biochip using a 3D trapping architecture?, ASME Summer Bioengineering Conference 2011.

17. Tripathi A., Chokshi T.V. and Chronis N. Worm-on-chip technology for studying aging of the nervous system in C. elegans, 12th International Conference on Micro Total Analysis Systems (µTAS), San Diego, USA, 12-16 October 2008, p. 1033-1035.

18. Kodandaramaiah S. and Chronis N. An opto-fluidic sensor for monitoring intracranial pressure, 12th International Conference on Micro Total Analysis Systems (µTAS), San Diego, USA, 12-16 October 2008, p. 1749-1751.

19. Chronis N. and Lee L.P., A 2-D Adjustable Pinhole Formed by Two Orthogonally Moving Micro-slits, The 13th international conference on solid-state sensors and actuators, 2005.

20. Chronis N. and Lee L.P. ?A polymer-based microrobotic workstation for single cell manipulation?, 8th International Conference on Micro Total Analysis Systems (µTAS), Malmö, Sweden, 26-30 September 2004, p. 407-409.

21. Chronis N. and Lee L.P. Polymer MEMS-Based Microgripper for Single Cell Manipulation, 17th IEEE International Conference on Micro Electro Mechanical Systems, Maastricht, 25-29 January 2004, p.17-20.

22. Jeong KH, Gang L. Liu, Chronis N. and Lee L.P. Tunable Microboublet Lens Array, 17th IEEE International Conference on Micro Electro Mechanical Systems, Maastricht, 25-29 January 2004, p.37-40.

23. Chronis, N. and Lee L.P. Total Internal Reflection-based Biochip for High Throughput Bioassays, 7th International Conference on Micro Total Analysis Systems (µTAS), Squaw Valley, California, 5-9 October 2003, p.1323-6.

24. Chronis N. and Lee L.P. Polymer-based Actuators Integrated Into Microfluidic Systems, 6th International Conference on Micro Total Analysis Systems (µTAS), Nara, Japan, 3-7 November 2002, p.754-7.

25. Chronis N., Lam W. and Lee L.P. A Microfabricated Bio-magnetic Separator Based On Continuous Hydrodynamic Parallel Flow, 5th International Conference on Micro Total Analysis Systems (µTAS), Monterey, California, 21-25 October 2001, p.345-6.


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